Species: Zanthoxylum bungeanum
Accession Number
SRP149639
Sample
Sample Location: the Research Centre for Engineering and Technology of Zanthoxylum, State Forestry Administration, Northwest A&F University, Fengxian, Shaanxi Province, China.
Sample Part: shoots , leaves , stems, flowersand fruits
Sequencing
Sequencing platform: PacBio RSII, Illumina HiSeq
Sequencing data: PacBio RSII: A total of 282,101 ROIs were generated, and the average length of the ROIs was 2819 bp. Illumina HiSeq: 23,869,770 clean reads
Assembly and Annotation
Assembly software: Proovread software, CD-HIT software, TransDecoder
Assembly result: A total of 65,711 ORFs were predicted, 52,331 of which were complete CDSs.
Annotation Method: NR, EggNOG, Pfam, Swiss-Prot, GO, KOG, KEGG, COG.
Data Url
Reference
Tian J, Feng S, Liu Y, et al. Single-Molecule Long-Read Sequencing of Zanthoxylum bungeanum Maxim. Transcriptome: Identification of Aroma-Related Genes[J]. Forests, 2018, 9(12): 765.
