Species: Taxus cuspidata
Accession Number
GSE121523
Sample
Sample Location: three-year-old cultivated Taxus trees, in March 2015 in a growth chamber of Hangzhou Normal University, Hangzhou, China.
Sample Part: fresh twig
Sequencing
Sequencing platform: Illumina HiSeq 4000
Sequencing data: 171,646,452 raw reads, 169,469,322 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 52,261 transcripts, with a mean length of 959 bp, N50 of 1,472 bp, and 33,895 unigenes, with a mean length of 841 bp, N50 pf 1,373bp.
Annotation Method: Nr, GO, SwissProt, KEGG, eggNOG
Data Url
Reference
Zhou T , Luo X , Yu C , et al. Transcriptome analyses provide insights into the expression pattern and sequence similarity of several taxol biosynthesis-related genes in three Taxus species[J]. BMC Plant Biology, 2019, 19(1): 33.
