Species: Coix lacryma-jobi

Accession Number

PRJNA431871

Sample

Sample Location: the National Institute of Agricultural Sciences (NAS, Wanju, Korea).

Sample Part: leaves, roots,and young seeds and mature seeds

Sequencing

Sequencing platform: PacBio RS II, HiSeq 2500

Sequencing data: 230,574,986 Hiseq2500 reads, 613,407 PacBio reads

Assembly and Annotation

Assembly software: Trinity

Assembly result: RNA-Seq Trinity: 111,850 unigens, average lengthof 866 bp, N50 of 1,220 bp. Iso-Seq: 31,177 unigens, average lengthof 2,475 bp, N50 of 2,999 bp.

Annotation Method: NR, UniProtKB/Swiss-Prot ,KEGG, GO, PlantTFDB 4.0

Data Url

https://www.ncbi.nlm.nih.gov/sra?linkname=bioproject_sra_all&from_uid=431871

Reference

Kang S H, Lee J Y, Lee T H, et al. De novo transcriptome assembly of the Chinese pearl barley, adlay, by full-length isoform and short-read RNA sequencing[J]. PloS one, 2018, 13(12).

Reference url

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0208344

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