Species: Chrysanthemum indicum

Accession Number

SRX2493247, SRX2493239

Sample

Sample Location: germplasm resource nursery of China Resources Sanjiu Medical & Pharmaceutical Co., Ltd., Yangxin County, Hubei Province,China.

Sample Part: roots, stems, leaves, buds, initial blooms, and full blooms

Sequencing

Sequencing platform: Illumina HiSeq 2000

Sequencing data: Diploid 50,879,590 reads, Tetraploid 56,522,734 reads

Assembly and Annotation

Assembly software: Trinity

Assembly result: 42,023 DIWNT(diploid) unigenes, with a mean transcript length of 727.72 bp, and 46,049 DIWT(tetraploid) transcripts, with a mean transcript length of 784.89 bp.

Annotation Method: nr, SwissProt, KEGG, COG, GO

Data Url

https://www.ncbi.nlm.nih.gov/biosample?Db=biosample&DbFrom=bioproject&Cmd=Link&LinkName=bioproject_biosample&LinkReadableName=BioSample&ordinalpos=1&IdsFromResult=361213

Reference

Han Z , Ma X , Wei M , et al. SSR marker development and intraspecific genetic divergence exploration of Chrysanthemum indicum based on transcriptome analysis[J]. BMC Genomics, 2018, 19(1): 291.

Reference url

https://link.springer.com/article/10.1186/s12864-018-4702-1

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