Species: Cassia obtusifolia
Accession Number
SRP144670
Sample
Sample Location:
Sample Part: seed, root, stem, leaf, and flower
Sequencing
Sequencing platform: Illumina HiSeq 4000, PacBIO RS II
Sequencing data: 361,427,021 clean reads of Illumina 4000 platform, 601,168 polymerase reads of Pacbio
Assembly and Annotation
Assembly software: Quiver, Proovread
Assembly result: 67,222 consensus isoforms(mean 2250 bp), 58,106 nonredundant transcripts
Annotation Method: NR, Swiss-Prot, KEGG, COG, KOG, GO, Pfam
Data Url
Reference
Deng Y, Zheng H, Yan Z C, et al. Full-Length Transcriptome Survey and Expression Analysis of Cassia obtusifolia to Discover Putative Genes Related to Aurantio-Obtusin Biosynthesis, Seed Formation and Development, and Stress Response[J]. Int. J. Mol. Sci., 2018, 19(9):2476.
