Species: Gymnema sylvestre
Accession Number
SRR5965322
Sample
Sample Location: ICAR-Directorate of Medicinal and Aromatic Plants Research, Boriavi, Anand, Gujarat which falls under a subtropical area of India(22.556°N, 72.951°E) at an altitude of 40.63 m above mean sea level.
Sample Part: leaf
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: 4.28 Gb (28,501,582 raw reads )
Assembly and Annotation
Assembly software: Trinity
Assembly result: 230,510 transcripts with maximum transcript length of 51,747 bp , 193,615 unigenes with maximum length of 51,747 bps and N50 of 806 bps, 58,274 CDSs were predicted from unigenes sequences with mean of 730 bp.
Annotation Method: Nr, uniprot, KOG, Pfam, PlantTFDB, GO, KEGG
Data Url
Reference
Kuldeepsingh A. Kalariya,Dipal B. Minipara,Ponnuchamy Manivel. De novo transcriptome analysis deciphered polyoxypregnane glycoside biosynthesis pathway in Gymnema sylvestre[J]. 3 Biotech,2018,8(9).
