Species: Dendrobium huoshanense
Sample
Sample Location: Hubei Zongkun Dendrobium Technology Development Co., Ltd., Lei Jia Dian Zhen Dong Ming Cun, Yingshan County, Huanggang City, Hubei Province, China (30°52′43.06″N, 115°47′3.42″E)
Sample Part: leaf, stem, root
Sequencing
Sequencing platform: Illumina Hiseq 2000
Sequencing data: 476,746,678 raw reads, 444,999,698 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 499,190 unigenes, with an average length of 887 bp, N50 of 1,161 bp. With an N50 length of 1,161 bp.
Annotation Method: NT, NR, Pfam, KOG/COG, SWISS-PROT, GO, KEGG
Reference
Zhou P N, Pu T Z, Gui C, et al. Transcriptome Analysis Reveals Biosynthesis of Important Bioactive Constituents and Mechanism of Stem Formation of Dendrobium huoshanense[J]. Scientific Reports, 2020, 10: 2857.
Reference url