Species: Taxus cuspidata
Accession Number
PRJNA493167
Sample
Sample Location: Institute of Medicinal Plant Development
Sample Part: roots, stems and leaves
Sequencing
Sequencing platform: Illumina Hiseq 2000
Sequencing data: 5,678,524 subreads with an average length of 2047 bp
Assembly and Annotation
Assembly software: 1.SMRTlink 4.0 2. CD-HIT-EST (−c 0.99) 3.Coding Genome Reconstruction Tool 4.BUSCO 5.Trinity 6.SOAP
Assembly result: 58,602 unigenes.
Annotation Method: KEGG, Swiss-Prot , Pfam, KOG, Nr, Nt, GO
Data Url
Reference
Kuang X , Sun S , Wei J , et al. Iso-Seq analysis of the Taxus cuspidata transcriptome reveals the complexity of Taxol biosynthesis[J]. BMC Plant Biology, 2019, 19(1).
