Species: Plumbago zeylanica
Accession Number
SRP144988
Sample
Sample Location: collected from the medicinal plant garden of Irula Tribe Women’s Welfare Society (ITWWS) Thandarai, Chengalpet
Sample Part: root and leaf
Sequencing
Sequencing platform: Illumina HiSeq2000
Sequencing data: 78.32 million raw reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: Leaf: 71,878 transcripts, with an average length of 911.57 bp, N50 value of 1,540 bp 1154 bp. Root: 101,290 transcripts, with an average length of 706.08 bp, N50 value of 1,154 bp.
Annotation Method: KEGG, GO, COG, NR
Data Url
Reference
Sundari B K R, Budhwar R, Dwarakanath B S, et al. De novo transcriptome analysis unravels tissue‑specific expression of candidate genes involved in major secondary metabolite biosynthetic pathways of Plumbago zeylanica: implication for pharmacological potential[J]. 2020.
