Species: Bletilla striata
Sample
Sample Location: Zhen’an County, Shaanxi Province, Xian, China
Sample Part: roots, stems, leaves, flowers, fruits
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: 44,116,822 raw reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 4,784,551 contigs, mean length of 50.68 bp, N50 of 48 bp. 115,004 transcript, mean length of 1,200.21 bp, N50 of 1,927 bp. 58,376 unigenes, mean length of 777.11 bp, N50 of 1,385 bp.
Annotation Method: NR, Swiss-Prot, KEGG, COG, GO
Reference
Niu Junfeng,Zhao Guangming,Mi Zeyuan,Chen Lijun,Liu Shuai,Wang Shiqiang,Wang Donghao,Wang Zhezhi. De novo sequencing of Bletilla striata (Orchidaceae) transcriptome and identification of genes involved in polysaccharide biosynthesis.[J]. Genetics and molecular biology,2020,43(3).
Reference url