Species: Schisandra chinensis
Accession Number
PRJNA533953
Sample
Sample Location: Zuojia town, Jilin City, Jilin Province, China.
Sample Part: fruits (green,light red and dark red)
Sequencing
Sequencing platform: Illumina HiSeq 2000
Sequencing data: 278,991,434 clean reads
Assembly and Annotation
Assembly software: CLC Genomics Workbench v8.0.2
Assembly result: 136,843 transcripts, with average length of 1,049 bp, N50 of 1,778 bp. 81,095 unigenes, with average length of 754 bp, N50 of 1,364 bp.
Annotation Method: Nr, PFAM, Swiss-ProtGO, KEGG, COG/KOG
Data Url
Reference
CHEN Chun-Yu,LIU Shu-Ying,YAN Yan,YIN Le,DI Peng,LIU Hui-Min,LIU Hong-Zhang.Candidate genes involved in the biosynthesis of lignan in Schisandra chinensis fruit based on transcriptome and metabolomes analysis[J].Chinese Journal of Natural Medicines,2020,18(09):684-695.
