Species: Terminalia arjuna
Accession Number
SRP099812
Sample
Sample Location: CSIR-CIMAP research campus and the residential colony, Lucknow
Sample Part: leaf and bark
Sequencing
Sequencing platform: Illumina NextSeq 500
Sequencing data: leaf: 66,860,000 raw reads,58,680,000 clean reads. Bark: 83,030,000 raw reads, 73,700,000 clean reads.
Assembly and Annotation
Assembly software: Trinity
Assembly result: Leaf: 87,692 transcripts, average lengths of 902.6 bp, N50 of 1,291 bp. Bark: 103,627 transcripts, average lengths of 757.4 bp, N50 of 962 bp.
Annotation Method: UniProt, GO, KEGG
Reference
Srivastava G, Sandeep, Garg A, et al. Transcriptome analysis and functional characterization of oxidosqualene cyclases of the arjuna triterpene saponin pathway[J]. Plant Science, 2020, 292.
Reference url