Species: Solanum trilobatum
Accession Number
SRP132765
Sample
Sample Location: Guduvanchery, Kancheepuram district
Sample Part: mature leaf
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: 136,220,612 raw reads and 124,413,306 clean read
Assembly and Annotation
Assembly software: Trinity
Assembly result: A total of 144,580 assembled transcripts were generated with a mean size of 823 bp, 128,934 unigenes with a mean length of 745 bp and N50 contig length of 1347 bp.
Annotation Method: NT, NR, SWISS-PROT, COG, KEGG, InterProScan, GO
Reference
Adil Lateef, Sudheesh K. Prabhudas, Purushothaman Natarajan. RNA sequencing and de novo assembly of Solanum trilobatum leaf transcriptome to identify putative transcripts for major metabolic pathways[J]. Scientific Reports, (2018) 8:15375
Reference url