Description
The genus Santalum belongs to the family Santalaceae and consists of 15 extant species. It is a slowgrowing, hemiparasitic tree distributed throughout tropical and temperate regions of India, Indonesia, Australia, and the Pacific Islands. Sandalwood is known to have cardiotonic, diuretic, diaphoretic, expectorant, aphrodisiac, hemostatic, anodyne, and antipyretic properties.
- SUMMARY
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Published journals
Plant Physiology
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Publish date
2018.02
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Sequence Method
Illumina HiSeq
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Assembly
SaGenomev1.0
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Assembly Method
SPAdes v. 3.6.1
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Genome Size
220.961 Mb
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Genome Coverage
90x
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Scaffolds
12821
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Contigs
29203
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N50
25151
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GC%
34.1
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Bioproject
PRJNA304116
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GCA Number
GCA_002925775.1
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Data
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/925/775/GCA_002925775.1_SaGenomev1.0/
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Reference url
Reference
Mahesh, H. B., Subba, P., Advani, J., Shirke, M. D., Loganathan, R. M., Chandana, S. L., ... & Gowda, M. (2018). Multi-omics driven assembly and annotation of the sandalwood (Santalum album) genome. Plant physiology, 176(4), 2772-2788.
- SUMMARY
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Published journals
Tree Genetics & Genomes
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Publish date
2019.04
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Sequence Method
Illumina NextSeq
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Assembly
ICFRI_Sandal_01
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Assembly Method
CLC Genomics workbench v. August, 2018
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Genome Size
320.306 Mb
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Genome Coverage
20x
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Scaffolds
74900
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Contigs
61850
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N50
7958
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GC%
37.9
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Bioproject
PRJNA422746
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GCA Number
GCA_009801155.1
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Data
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/801/155/GCA_009801155.1_ICFRI_Sandal_01/
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Reference url
Reference
Dasgupta, M. G., Ulaganathan, K., Dev, S. A., & Balakrishnan, S. (2019). Draft genome of Santalum album L. provides genomic resources for accelerated trait improvement. Tree Genetics & Genomes, 15(3), 34.
- SUMMARY
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Sequence Method
Oxford Nanopore
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Assembly
ASM291163v1
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Assembly Method
MECAT v. 1.0
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Genome Size
196.101 Mb
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Genome Coverage
75x
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Contigs
180
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N50
4363285
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GC%
36.5
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Bioproject
PRJNA411901
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GCA Number
GCA_002911635.1
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Data
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/911/635/GCA_002911635.1_ASM291163v1/