Description
Kochia scoparia (Bassia scoparia) is a large annual herb in the family Amaranthaceae native to Eurasia. It has been introduced to many parts of North America, where it is found in grassland, prairie, and desert shrub ecosystems. The seeds are used in traditional Chinese medicine to help regulate disorders such as hyperlipidemia, hypertension, obesity, and atherosclerosis. They contain momordin Ic, a triterpene saponin.
- SUMMARY
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Published journals
Genome Biology and Evolution
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Publish date
2019.10
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Sequence Method
Illumina, PacBio
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Assembly
CSU_KoSco_1.0
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Assembly Method
MeCat v. April-2018
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Genome Size
711.357 Mb
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Genome Coverage
300.0x
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Scaffolds
19671
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Contigs
61599
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N50
20773
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GC%
32.9
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Bioproject
PRJNA526487
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GCA Number
GCA_008642245.1
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Data
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/642/245/GCA_008642245.1_CSU_KoSco_1.0/
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Reference url
Reference
Eric L Patterson, Christopher A Saski, Daniel B Sloan, Patrick J Tranel, Philip Westra, Todd A Gaines, The Draft Genome of Kochia scoparia and the Mechanism of Glyphosate Resistance via Transposon-Mediated EPSPS Tandem Gene Duplication, Genome Biology and Evolution, Volume 11, Issue 10, October 2019, Pages 2927–2940, https://doi.org/10.1093/gbe/evz198