Description
American pokeweed, Phytolacca americana, belongs to the Phytolaccaceae family of flowering plants. P. americana (pokeweed) is the most well-studied Phytolacca species due to its broad agricultural and medical applications. Pokeweed synthesizes PAP, an N-glycosidase and RIP that depurinates the conserved α-sarcin loop of large rRNAs. PAP exhibits antiviral activity against diverse plant and animal viruses.
- SUMMARY
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Published journals
Frontiers in Plant Science
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Publish date
2019.08
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Sequence Method
Illumina
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Assembly Method
Discovar De Novo
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Genome Size
933 Mb
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Genome Coverage
83x
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Scaffolds
847766
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N50
35208
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Bioproject
PRJNA544344
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Data
https://www.ncbi.nlm.nih.gov/sra?linkname=bioproject_sra_all&from_uid=544344
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Reference url
https://www.frontiersin.org/articles/10.3389/fpls.2019.01002/full
Reference
Neller KCM, Diaz CA, Platts AE, Hudak KA. De novo Assembly of the Pokeweed Genome Provides Insight Into Pokeweed Antiviral Protein (PAP) Gene Expression. Front Plant Sci. 2019;10:1002. Published 2019 Aug 6. doi:10.3389/fpls.2019.01002